
Fits a survival model using the censored/parsnip framework. The outcome must be specified as separate time and event columns (following survival::Surv() convention), and the user must explicitly choose an engine.
Source: R/model-fit-survival.R
tr_fit_survival.RdFits a survival model using the censored/parsnip framework. The
outcome must be specified as separate time and event columns (following
survival::Surv() convention), and the user must explicitly choose an
engine.
Usage
tr_fit_survival(
data,
time_col,
event_col,
engine = c("cox_ph", "survival_rf"),
predictors = NULL
)Arguments
- data
A data frame containing predictors, a time column, and an event column.
- time_col
Character. Name of the column giving time to event or censoring.
- event_col
Character. Name of the column indicating event status (1 = event occurred, 0 = censored), following standard survival analysis convention.
- engine
Character. One of
"cox_ph"(Cox Proportional Hazards) or"survival_rf"(Random Survival Forest via theaorsfengine).- predictors
Character vector of predictor column names. If
NULL(default), all columns excepttime_colandevent_colare used.
Value
A fitted triageR_survival_model object (list) containing the
fitted workflow, engine, and time/event/predictor column names.
Examples
if (requireNamespace("survival", quietly = TRUE)) {
library(survival)
lung_clean <- lung
lung_clean$status <- lung_clean$status - 1 # convert 1/2 to 0/1
lung_clean <- lung_clean[stats::complete.cases(lung_clean), ]
model <- tr_fit_survival(lung_clean, time_col = "time",
event_col = "status", engine = "cox_ph")
}
#> Survival model fitted successfully using engine: cox_ph